Publications

Goeppert’s publications

6. “Silicon Nitride Nanopores Formed by Simple Chemical Etching: DNA Translocations and TEM Imaging” , Zehui Xia, Andre Scott, Rachael Keneipp, Joshua Chen, Brian DiPaolo, Marija Drndić, ACS Nano, asap2022

(Collaboration with Drndic lab, University of Pennsylvania, https://web.sas.upenn.edu/drndicgroup/)

https://pubs.acs.org/doi/10.1021/acsnano.2c07240

5. DNA Extraction from Mars Analog Soils and Their Characterization with Solid-State Nanopores , Zehui Xia, Margaret Patchin, Chris McKay, Marija Drndić, Astrobiology, Volume 22, Issue 8, 2022. https://doi.org/10.1089/ast.2021.0051 (September 2022 Issue)

https://www.liebertpub.com/doi/10.1089/ast.2021.0051

4. Protein-enabled detection of ibuprofen and sulfamethoxazole using solid-state nanopores, Zehui Xia, Chih-Yuan Lin, Marija Drndić, Proteomics, 2100071, 2022.

3. Devices for Nanoscale Guiding of DNA through a 2D Nanopore, David J. Niedzwiecki, Brian DiPaolo, Chih-Yuan Lin, Alice Castan, Rachael Keneipp, Marija Drndić, ACS Sensors 6, 7, 2534–2545, 2021. https://pubs.acs.org/doi/10.1021/acssensors.1c00829

2. Invited Article & Cover Art for March Issue: Detection of single analyte and environmental samples with silicon nitride nanopores: Antarctic dirt particulates and DNA in artificial seawater, David J. NiedzwieckiYung-Chien ChouZehui XiaFederico Thei and Marija Drndić, Review of Scientific Instruments 91, 031301, 2020.   https://doi.org/10.1063/1.5138210. AIP Scilight: https://aip.scitation.org/doi/10.1063/10.0001022

1. Single-Stranded DNA Translocation Recordings Through Solid-State Nanopores on Glass Chips at 10-MHz Measurement Bandwidth, Chien Chen-Chi, Siddharth Shekar, David J. Niedzwiecki, Kenneth L. Shepard, Marija Drndić, ACS Nano 13 (9), 10545, 2019. DOI:10.1021/acsnano.9b04626. 

Publications from other laboratories using Goeppert’s technology

9. Combining dynamics Monte Carlo with machine learning to study nanoparticle translocation, Luiz Fernando Vieira, Alexandra C Weinhofer, William C Oltjen, Cindy Yu, Paulo Roberto de Souza Mendes, Michael JA Hore, Soft Matter 18 (28), 5218-5229, 2022.

8. Orientation-locked DNA origami for stable trapping of small proteins in the NEOtrap, Chenyu Wen, Eva Bertosin, Xin Shi, Cees Dekker, Sonja Schmid, bioRxiv, 2022.

https://www.biorxiv.org/content/10.1101/2022.09.09.507286v1

7. Transport receptor occupancy in Nuclear Pore Complex mimics, Alessio Fragasso, Hendrik W. de Vries, John Andersson, Eli O. van der Sluis, Erik van der Giessen, Patrick R. Onck, Cees Dekker, doi: https://doi.org/10.1101/2021.12.22.473839, bioRxiv, 2022.

Published in: Nano Research 15, 9689-9703, 2022. (Published: 01 July 2022)

https://link.springer.com/article/10.1007/s12274-022-4647-1

https://www.sciopen.com/article/preview_pdf?id=1536517206387159042&activityId=

https://www.biorxiv.org/content/10.1101/2021.12.22.473839v1

6. The NEOtrap-en route with a new single-molecule technique, Sonja Schmid, Cees Dekker, Iscience vol. 24, 10, 103007, 2021.

5. Nanopore electro-osmotic trap for the label-free study of single proteins and their conformations, Sonja Schmid, Pierre Stommer, Hendrik Dietz, Cees Dekker, Nature Nanotechnology, 2021. https://doi.org/10.1038/s41565-021-00958-5 https://www.nature.com/articles/s41565-021-00958-5?proof=t%29.

4. Nanopores: a versatile tool to study protein dynamics, Sonja Schmid, Cees Dekker, Essays Biochem 65 (1): 93–107, 2021. https://portlandpress.com/essaysbiochem/article-abstract/65/1/93/227202/Nanopores-a-versatile-tool-to-study-protein?redirectedFrom=fulltext

3. A designer FG-Nup that reconstitutes the selective transport barrier of the nuclear pore complex, Alessio Fragrasso, Hendrik W. de Vries, John Andersson, Eli O. van Der Sluis, Erik van Der Giessen, Andreas Dahlin, Patrick R. Once, Cees Dekker, Nature Communications 12, Article number: 2010, 2021. https://www.nature.com/articles/s41467-021-22293-y

2. Translocation of soft phytoglycogen nanoparticles through solid-state nannochannels, William R. Lenart, Weiwei Kong, William C. Oltjena, Michael. J. A. Hore,  Journal of Materials Chemistry B, 41, 2019https://pubs.rsc.org/en/content/articlelanding/2019/tb/c9tb01048c#!divAbstract

1. Goeppert cited for its advance in solid state nanopore sensors in the review paper: Recent progress in solid-state nanopores, Kidan Lee, Kyeong-Beom Park, Hyung-Jun Kim, Jae-Seok Yu, Hongsik Chae, Hyun-Mi Kim, Ki-Bum Kim, Advanced Materials 30 (42), 2018.
http://doi.wiley.com/10.1002/adma.201704680